Insertion junction: CLIP2.054021_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.054021
Chromosome:chromosome 16
Location:6008660
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g678400 (1 of 1) PTHR22847//PTHR22847:SF412 - WD40 REPEAT PROTEIN // TRANSDUCIN/WD40 DOMAIN-CONTAINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCAGGGCGCCGCTCCCTCGGCACCTGCACGAACATCAACATCGACAGC
Internal bar code:GTAAGGGTGTCCCTGACTCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1708
LEAP-Seq percent confirming:53.8462
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CACACCCAAACACATACGCG
Suggested primer 2:AAGCAACGAGACGGACCAAT