Insertion junction: CLIP2.054024_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054024
Chromosome:chromosome 3
Location:5154731
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g181000 (1 of 6) 2.8.2.8 - [Heparan sulfate]-glucosamine N-sulfotransferase / PAPS:N-desulfoheparin sulfotransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGAAGCTGTGCGCCCCGTCCACAAGCAGGTCCTGAAACAGCTGTCGG
Internal bar code:ACGGCTTCATTAAATGGGCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:5620
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCAGATGTTGCATGCGC
Suggested primer 2:GTGAGCCACTACCACATGCT