Insertion junction: CLIP2.054035_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054035
Chromosome:chromosome 6
Location:6939248
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00081283

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACACGGGTTCGAATCCCGTTACGACCTCATCCTTTTGCACTGCATCAC
Internal bar code:CGCACTAGACCTGCAAACACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2586
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGCATCCACAGTACCTT
Suggested primer 2:AGTTCACTTGCCACCTACGG