Insertion junction: CLIP2.054041_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054041
Chromosome:chromosome 13
Location:2227688
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g578012 (1 of 1) PTHR11061//PTHR11061:SF29 - RNA M5U METHYLTRANSFERASE FAMILY // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCCGGCTCGTGCAGGGCCCCACGCTCACCGCCGTCGCCCGCCGGCCC
Internal bar code:TCACTGCTAAAACCTAATGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1400
LEAP-Seq percent confirming:38.8889
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GACACAGACACACAAACCGC
Suggested primer 2:GGCGTGAGGGCGTATAATGA