Insertion junction: CLIP2.054041_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054041
Chromosome:chromosome 13
Location:2227702
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g578012 (1 of 1) PTHR11061//PTHR11061:SF29 - RNA M5U METHYLTRANSFERASE FAMILY // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAGTGATAACGCCGCTTCGCCGAGTTTGCATGAGCATTGTGATACTCA
Internal bar code:TGACCATAAAGTGGACTGATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:393
LEAP-Seq percent confirming:46.875
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGTGAGGGCGTATAATGA
Suggested primer 2:GACACAGACACACAAACCGC