Insertion junction: CLIP2.054047_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.054047
Chromosome:chromosome 16
Location:2385096
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659550 (1 of 3) 2.4.1.228 - Lactosylceramide 4-alpha-galactosyltransferase / Histo-blood group P(k) UDP-galactose intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAACACACACATACGGCAGACGCTCGATATTGTTAGGTATCCGTAAGGC
Internal bar code:ATACTTGTGAGACCCAGAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:418
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTCACGTCACGGACATGA
Suggested primer 2:GCCGTGGAACTTGTACCTGA