Insertion junction: CLIP2.054054_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.054054
Chromosome:chromosome 12
Location:667940
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g493200 (1 of 39) IPR009003 - Peptidase S1, PA clan CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAGGCCCGAGCAGGCTCTCCAAAGCCGCCCGCAGGTCGACCAAAGCC
Internal bar code:GACCAATAGTAGTACTTATAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1492
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAAACCAGGTGCCTATCT
Suggested primer 2:ACAATGCATAGTGGCCAGCT