Insertion junction: CLIP2.054063_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054063
Chromosome:chromosome 8
Location:3201057
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g376720 CEP7 Cysteine endopeptidase; (1 of 5) 3.4.22.33 - Fruit bromelain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGC
Internal bar code:CAGCTGGTGGAGCTTTAATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4349
LEAP-Seq percent confirming:78.7879
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:99

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTTGTTGGACACCTTGAC
Suggested primer 2:GTCCACCACGTACCGTATCC