Insertion junction: CLIP2.054066_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054066
Chromosome:chromosome 6
Location:8681639
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g310100 (1 of 6) IPR000719//IPR001245//IPR002290//IPR011009//IPR020635//IPR029016 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // GAF domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCGAGGTAGGTCAACCCTGTGTCGTTACCGCCAACCACCACGGCTCAG
Internal bar code:AGTACTTGAAGGCTCTTTGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3637
LEAP-Seq percent confirming:86.4865
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGCCACTCTATGCTGCTC
Suggested primer 2:CTGGGTCAGGTCGTCGAAAA