Insertion junction: CLIP2.054085_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054085
Chromosome:chromosome 12
Location:5835484
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533250 (1 of 2) IPR000104//IPR001394//IPR028889 - Antifreeze protein, type I // Peptidase C19, ubiquitin carboxyl-terminal hydrolase // Ubiquitin specific protease domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTACTGCCGTCCCTGCTGCTGCTACTGCCGGGGCCGAGGGCGACACC
Internal bar code:TGCCCCTTGTGGGGCTGAGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:360
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCAGCACGGAGTAAAT
Suggested primer 2:CACCATGACACGTGGCAATG