Insertion junction: CLIP2.054089_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054089
Chromosome:chromosome 7
Location:4432016
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g343250 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCGTCCACGCGCCAGGCTGGCTGCTGCGTTCGCTGCTGTCGCCGCTTC
Internal bar code:AACTTGATTGTTGTCTATATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2519
LEAP-Seq percent confirming:46.8085
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CTGACGGGAAGGCATGAAGT
Suggested primer 2:CTCACGTAGCGGCTCTACTG