Insertion junction: CLIP2.054092_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054092
Chromosome:chromosome 12
Location:3589668
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00231395

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGGCACCTGGTTTGGCTATGTGCCTGTTGAAACCGACCCCGGCTATGT
Internal bar code:CGGAGCCGCCAAGAGCTCGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1841
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAAACAGGCTTCACTGC
Suggested primer 2:CCTATAAAGAGCTGCCGGGG