Insertion junction: CLIP2.054103_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054103
Chromosome:chromosome 1
Location:3192887
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g020305 SDH4 Succinate dehydrogenase subunit D; (1 of 1) IPR007992 - Succinate dehydrogenase [ubiquinone]cytochrome b small subunit, CybS intron
Cre01.g802251 (1 of 2) PF05328 - CybS, succinate dehydrogenase cytochrome B small subunit (CybS) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCCTCCACTCATGCCTCAAGCGGCCTAGCAACTCATTCGTGGCCCTCA
Internal bar code:GTTTGTATTCAGGGATCCTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:72
LEAP-Seq percent confirming:6.66667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTCTCCAGTGGTTCGTG
Suggested primer 2:GTAGCTATCCCCGTGCACTC