Insertion junction: CLIP2.054109_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054109
Chromosome:chromosome 8
Location:3688779
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g380151 (1 of 1) PF00628//PF15613//PF15614 - PHD-finger (PHD) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCATGCATGTAACCCCCTCCCCGCGCAACACCACACCTGCTGTCTACTT
Internal bar code:ATTTCTTTACCGGCGCATTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:562
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTAACACTTACCGGTGCT
Suggested primer 2:CTCGTTTGGGTCCACGTGTA