Insertion junction: CLIP2.054110_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054110
Chromosome:chromosome 17
Location:5059272
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g736300 (1 of 1) IPR000104//IPR011047//IPR018391 - Antifreeze protein, type I // Quinonprotein alcohol dehydrogenase-like superfamily // Pyrrolo-quinoline quinone beta-propeller repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCGTCAATGGATGGATGGCTGGGTCGCGTGATGTCTGGGCAAGAGCG
Internal bar code:TTGGAGGCAGGCGACGGTCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:144
LEAP-Seq percent confirming:35.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGAAGGAGACACGCATG
Suggested primer 2:AGGAGAAGACGGCCCTGTAT