Insertion junction: CLIP2.054113_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.054113
Chromosome:chromosome 12
Location:5149550
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g526700 RBL9 Rhomboid-like protease; (1 of 11) 3.4.21.105 - Rhomboid protease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAAACGGGTTGGGCAGCTGCGGCGGACCCGTGGAGGTGGCGGCAGCCA
Internal bar code:ATACCTATAGAACACCCCTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1258
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTGCTGACGGAAATCGCG
Suggested primer 2:GTTGTGCGTGTGTGTCTTCC