Insertion junction: CLIP2.054118_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054118
Chromosome:chromosome 12
Location:3589663
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00231395

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGATGCCACAGCAGAGCCAACCGTGGGAGTGTGACAGGTCGTGGTGGGA
Internal bar code:TCGTGCTTGGGGCTCTGATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1712
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CCTATAAAGAGCTGCCGGGG
Suggested primer 2:CCACAAACAGGCTTCACTGC