Insertion junction: CLIP2.054119_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054119
Chromosome:chromosome 1
Location:7754394
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g054600 (1 of 8) IPR000157 - Toll/interleukin-1 receptor homology (TIR) domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGGGTTACCGGTCGTACGTATAGGATCCTACACGGCCATTCACGGCTG
Internal bar code:CGAGGAACGGCTGTGTATGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1583
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGTAGCACTCCCTAGCT
Suggested primer 2:CCAGGGTGGAGTTTGAGTCC