Insertion junction: CLIP2.054130_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054130
Chromosome:chromosome 12
Location:5991439
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534200 (1 of 1) PTHR24365//PTHR24365:SF381 - TOLL-LIKE RECEPTOR // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTATTATCCTGCCCTCTTCCCAGCTGCCCTTACAAGCCTTTCCGCCT
Internal bar code:GGAAGAGAAACACAGGTACGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1683
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TACAGGAGGGGATGGGGAAG
Suggested primer 2:CGCCTCCACTGCCACTTTTA