Insertion junction: CLIP2.054133_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.054133
Chromosome:chromosome 12
Location:3046270
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g501450 SDIR1 RING finger-type E3 ligase, SDIR1 ortholog; (1 of 1) PTHR14155//PTHR14155:SF163 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACGTCACGTCCGTGCACCACCCACCACAAAGCTGGCTGGAAGTACGCC
Internal bar code:ATACAGAGACTGTCCCGCTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:724
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGGTTCGTCGCTTTAGA
Suggested primer 2:ATCAGCAGCCTCTGTGTTCC