Insertion junction: CLIP2.054142_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054142
Chromosome:chromosome 3
Location:614905
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145487 (1 of 5) IPR001841//IPR013083 - Zinc finger, RING-type // Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGCCCGCTAGTCGCGCGCCAGGTAACAGCAGGCATGCTTCTGCTGTG
Internal bar code:TGGTCTCCGGGTTGTCCAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2828
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCTTCGTTCGCCAAAAAG
Suggested primer 2:GCTGGTTTGCAAGCATGGAA