Insertion junction: CLIP2.054146_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054146
Chromosome:chromosome 7
Location:936621
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319001 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACATGTCGAGTTGGAGGCCGGTCGGAGTTTGCGTTCTTGGTCATTGTAC
Internal bar code:ACCAAAGCCGTCTAACTTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1643
LEAP-Seq percent confirming:79.2453
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGAGGTAGAGAGACGCCG
Suggested primer 2:CGCCAATCGTCTCTTTGCTG