Insertion junction: CLIP2.054158_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.054158
Chromosome:chromosome 12
Location:4776130
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g523250 MAE15 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF); MATE efflux family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGAATTCTGGCCTGCGACCCGCCGCCCGCTCCTCATCCCTGCAGGGCG
Internal bar code:TAGCGCGGGCCGCCGGCACCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1809
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGTTCTCTCGATCGTTCT
Suggested primer 2:CACACAGACACATTGGCAGC