Insertion junction: CLIP2.054159_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054159
Chromosome:chromosome 12
Location:5896950
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533550 PYK1 (1 of 1) PTHR11817:SF5 - PYRUVATE KINASE-RELATED; Pyruvate kinase 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGGTGCAGCTGACCGCGGGCCAGGAGGTGACCATTACCACCGACTACG
Internal bar code:GCTGGAGGGAGTGAGATTCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:198
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTTCCAACCGTACCGTAA
Suggested primer 2:ATTTTCGCGCGTCATGTAGC