Insertion junction: CLIP2.054162_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054162
Chromosome:chromosome 6
Location:1205832
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258363 (1 of 1) IPR000048//IPR001611//IPR003591 - IQ motif, EF-hand binding site // Leucine-rich repeat // Leucine-rich repeat, typical subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGTGCAGCTCAGCAGCTGGATGTGAAATTTGGGGTGCCAGAAGGCCG
Internal bar code:GTGTGGTAGGTTATTTCTAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1124
LEAP-Seq percent confirming:28.2609
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACAGGAGTCAGATGGCG
Suggested primer 2:GTGTGGAGGTAGCGAACACA