Insertion junction: CLIP2.054164_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054164
Chromosome:chromosome 7
Location:1781380
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325724 PTP1 Protein tyrosine phosphatase 1; (1 of 1) K18078 - protein tyrosine phosphatase domain-containing protein 1 [EC:3.1.3.-] (PTPDC1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGTCGGTCCCTGCTCGCCGCTTTCCTCGCCCACGCAGGAGGTGGGCGA
Internal bar code:TAGTTATTCTTTAACATTCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2118
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGCTAGAGATTGCCCTCC
Suggested primer 2:TTCGCCCCCAATTGTAGGAC