Insertion junction: CLIP2.054167_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054167
Chromosome:chromosome 2
Location:1249054
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g081950 (1 of 19) IPR000104//IPR000719//IPR001245//IPR002290//IPR011009//IPR020635 - Antifreeze protein, type I // Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTGCGGCAGCGTAGATGGTAGGCCCCAGCAAGCGACGAGTTAGGCCT
Internal bar code:GTTAACCTGCGTCTTAGTCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4274
LEAP-Seq percent confirming:90.625
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGAACATGATGCATGCAG
Suggested primer 2:CACCTTTGCTGCAGACACAC