Insertion junction: CLIP2.054183_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.054183
Chromosome:chromosome 12
Location:1897679
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g511950 (1 of 1) IPR003591//IPR013210 - Leucine-rich repeat, typical subtype // Leucine-rich repeat-containing N-terminal, plant-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCCGAGTGGGGCGCGGATGATGCATTCCCGCAGCTGCAGGTGTGTGGG
Internal bar code:TCTCCTCTTGAAGGTCTATAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:106
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGACTTGGACACGACCGA
Suggested primer 2:TTCCTCTTCCCTTGCGACAC