Insertion junction: CLIP2.054184_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.054184
Chromosome:chromosome 16
Location:1122760
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649800 PPR3,CYCR6 (1 of 1) PF02984//PF13041 - Cyclin, C-terminal domain (Cyclin_C) // PPR repeat family (PPR_2); PentatricoPeptide Repeat protein 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTCCCGCATGATGCCGGGTGCCAGGACCAATGTAAGAACCCCTGATGG
Internal bar code:TAAAGTGTATCCACGGGTGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2158
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTGACCACACGCTTTCC
Suggested primer 2:CTAGTCCGAGCTAACGCAGG