Insertion junction: CLIP2.054188_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054188
Chromosome:chromosome 11
Location:602307
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467609 (1 of 3) K10587 - ubiquitin-protein ligase E3 A (UBE3A, E6AP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCAATTGAGAAATGGAGCAAGTGGGGTTACATACATGATGAATGAAGG
Internal bar code:TTTGTATACTCAAACCGGTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:198
LEAP-Seq percent confirming:52.381
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GAATGCTACCCCCTGGCTTT
Suggested primer 2:GGTAGTGGAGTGGGTGTGTG