Insertion junction: CLIP2.054188_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054188
Chromosome:chromosome 13
Location:3905466
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre13.g589870 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAGTAGCAGGCGTGCCCAGCTCTGGGGAATGGCGGGCGTAGAGGGTAT
Internal bar code:CTGGTTTGGAGTTCTTGGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:87
LEAP-Seq percent confirming:9.09091
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTTACGCAGTGACGTCGT
Suggested primer 2:CATCAGGTTTTTGGCCAGCC