Insertion junction: CLIP2.054193_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054193
Chromosome:chromosome 16
Location:5218581
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684550 HAR2 Possible 3-hydroxyacid dehydrogenase; (1 of 3) 1.1.1.26 - Glyoxylate reductase / NADH-dependent glyoxylate reductase 5'UTR
Cre16.g684600 SEC5 (1 of 1) K17637 - exocyst complex component 2 (EXOC2, SEC5); Component of the Exocyst Complex 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTTTTATAAACAGAGTATTTGATTGAAAGCGGCAACACTCCAGCGCTT
Internal bar code:GTCGCCCATCCACCGTCGGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1224
LEAP-Seq percent confirming:43.4783
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGGCAGCTGGAAAGCTAC
Suggested primer 2:GTGAGCGATGCAATGAGCTG