Insertion junction: CLIP2.054199_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054199
Chromosome:chromosome 10
Location:5451485
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g457450 (1 of 1) PTHR31400:SF1 - PROTEIN GUCD1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCCTTGGTGCTGTGGGCGAGCACCCCGAAAGCTCGCTTCCAGAGCTTG
Internal bar code:CGTGCGAAAAAAGTTTAAGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3050
LEAP-Seq percent confirming:79.4521
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGAAGACTCCCTTGGTC
Suggested primer 2:TAGAAGGACACGTGCAACCC