Insertion junction: CLIP2.054204_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054204
Chromosome:chromosome 10
Location:274574
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g419550 (1 of 1) PTHR28141//PTHR28141:SF1 - FAMILY NOT NAMED // 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAATCGCCTCCCTCGGCGCCACCCCCGTCTTCCCCACCTCCGGCTCCT
Internal bar code:AAGGGTCATGATTGTAGTTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:708
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTATGCATGGTGCTTCG
Suggested primer 2:ACTGCAATCGACCAGACGTT