Insertion junction: CLIP2.054209_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054209
Chromosome:chromosome 2
Location:3949116
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102300 (1 of 1) PTHR31013 - THAUMATIN FAMILY PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCACCAGAGGCCCAGAGCAGGAGGGCATCGCATATCCGCACGGCACCA
Internal bar code:GAGGTTCAAATACAAAGTTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5972
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGCGTGTTTGCAAGGTGC
Suggested primer 2:TTGTTCCGAAGCGCTTTTGG