Insertion junction: CLIP2.054209_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.054209
Chromosome:chromosome 2
Location:3950059
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102300 (1 of 1) PTHR31013 - THAUMATIN FAMILY PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGGCCTGACCCCGCCGTCGCCTCCCCTCCGACGCCACTGCAGTGACCT
Internal bar code:GAGGTTCAAATACAAAGTTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1512
LEAP-Seq percent confirming:38.7097
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTTCCGAAGCGCTTTTGG
Suggested primer 2:TAAGCGTGTTTGCAAGGTGC