Insertion junction: CLIP2.054210_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054210
Chromosome:chromosome 1
Location:5163256
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036050 MLH1 DNA mismatch repair protein; (1 of 1) K08734 - DNA mismatch repair protein MLH1 (MLH1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCTACGCGAACACACCACATCGCATGACGCTGTACACACGTGTATACA
Internal bar code:ATCTAGTTCGTTCAGAATCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1059
LEAP-Seq percent confirming:61.5385
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ATACCGTGTGGAGCAGTTGG
Suggested primer 2:AGAGGACCTCGCCATTCTCT