Insertion junction: CLIP2.054213_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054213
Chromosome:chromosome 3
Location:6693245
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g195600 (1 of 1) 3.2.1.28 - Alpha,alpha-trehalase / Trehalase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCAGGTGAGATGGGGCTGCGTGACATACAACACAAAAGTGGCTTTGGC
Internal bar code:TAGGAATAGGGCGGTCTTTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3818
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGTAAGCACGTAAGCATG
Suggested primer 2:TCCTACTGGGTCATCCTGGG