Insertion junction: CLIP2.054220_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054220
Chromosome:chromosome 6
Location:5675932
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g287950 SRH13 (1 of 1) K10779//K10876 - transcriptional regulator ATRX [EC:3.6.4.12] (ATRX) // RAD54-like protein 2 [EC:3.6.4.12] (RAD54L2); SNF2-related DNA/RNA helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGAACGTGCACGAGTGGGTACAGCGGCGTCACGGCGGGCTGCGCCCAC
Internal bar code:ATTATGTTCCGCTATGATCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2401
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCATGTGCAGACCTTGAT
Suggested primer 2:CTGCTCCGTATGCACCGTAT