Insertion junction: CLIP2.054220_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054220
Chromosome:chromosome 6
Location:5675935
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g287950 SRH13 (1 of 1) K10779//K10876 - transcriptional regulator ATRX [EC:3.6.4.12] (ATRX) // RAD54-like protein 2 [EC:3.6.4.12] (RAD54L2); SNF2-related DNA/RNA helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAATGTTTGCAAAAGGCAGCCGCCGCAGCCCACGCGCCACTAGCCGCGC
Internal bar code:GTGTGGCCATTGAGGTGCACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2358
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTCCGTATGCACCGTAT
Suggested primer 2:CCCCATGTGCAGACCTTGAT