Insertion junction: CLIP2.054221_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054221
Chromosome:chromosome 2
Location:5267775
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112600 (1 of 3) PTHR13780//PTHR13780:SF49 - AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACCCCGGCTGCAGCAGTTCTGCTTCGAACAAAATTTTTCCATGGCTTC
Internal bar code:CGCGCTGATCTTTAACGATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1780
LEAP-Seq percent confirming:15.9091
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCGACAAGTGGAAAGAGG
Suggested primer 2:GATGATGAGGAGGAGGCAGC