Insertion junction: CLIP2.054221_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054221
Chromosome:chromosome 2
Location:5267780
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112600 (1 of 3) PTHR13780//PTHR13780:SF49 - AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCAGCTGTCCAGCGCAGCTGGCAATTTCTCCGCACAGTTTCTCTGACG
Internal bar code:AGACACTATAGTAGATAGAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:852
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GATGATGAGGAGGAGGCAGC
Suggested primer 2:AGGCGACAAGTGGAAAGAGG