Insertion junction: CLIP2.054223_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054223
Chromosome:chromosome 16
Location:7672988
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g685613 (1 of 1) PF02689//PF05970 - Helicase (Herpes_Helicase) // PIF1-like helicase (PIF1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCTGCGCGTCGTGGTTGACTGCCATTTACCACCACAGCTTCCATGACG
Internal bar code:GAGATGCGTGTGGTCACTCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4416
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCCGGAGTCTTTGGTAG
Suggested primer 2:CCTACCGCAGAGCTGTATGG