Insertion junction: CLIP2.054230_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054230
Chromosome:chromosome 1
Location:5030212
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g034900 CDPK5 (1 of 4) PTHR24347:SF138 - PROTEIN F32D8.1; Calcium/calmodulin-dependent protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACATACATCAAACGTGAGGATGTGGGCAATCAATTTCTACGCAATAG
Internal bar code:CTGTTGCATGTAAACGTAAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5345
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTGATATCTGCCCCTTCGCA
Suggested primer 2:TCTCCGCCACATCACTTGAC