Insertion junction: CLIP2.054239_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.054239
Chromosome:chromosome 16
Location:2326430
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre16.g659000 ATG13 (1 of 1) K08331 - autophagy-related protein 13 (ATG13); AuTophaGy related CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCTGTGGGGATGCGGCCGGTGGGGTGAGGCGATATATGGCGGCCGGGG
Internal bar code:CTAATTAGGTAATTCTAATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:295
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTGGGTTGTTGGAAGCCT
Suggested primer 2:TGCCACACGTGTAACATGGT