Insertion junction: CLIP2.054241_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054241
Chromosome:chromosome 13
Location:4039945
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00110370

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGTGCCGGACTGCCGGTGTGAGCGTGCGGTGTGAGTGTGTGACCGCCC
Internal bar code:TTGGATGTAGCACGCCATGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2715
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTAATGCTAGCTGGGCCG
Suggested primer 2:GCGTGTGTAGCCTAGGGTTT