Insertion junction: CLIP2.054241_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054241
Chromosome:chromosome 13
Location:4039953
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00110370

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGACGGGGCAATGGCGGCTTCCAAGGTGGCTTTCCGCGCCCCACCACTG
Internal bar code:ATATGGTTTTGGGTAACTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2156
LEAP-Seq percent confirming:37.7358
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGTGTAGCCTAGGGTTT
Suggested primer 2:TTCTAATGCTAGCTGGGCCG