Insertion junction: CLIP2.054244_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054244
Chromosome:chromosome 7
Location:1833206
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325733 (1 of 100) IPR001810 - F-box domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCGCCAGCCTGCTACAGCCGCCGCTAGGTCGGGGCAGTAGCACAGCG
Internal bar code:TCGTTCAGCGAGGCAGGGCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1564
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GGATCCAGCGCGTCAAATTC
Suggested primer 2:GTTAGGCACAGGTCGGTCAA