Insertion junction: CLIP2.054248_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054248
Chromosome:chromosome 2
Location:4003348
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102776 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCAACAGCCGTGGCTGCAGGTGTGTCCTTGAGATTGGCAGGAGCAAC
Internal bar code:AGGTTTCCGCGGTGTTCCGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4873
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATCACCACTACTGCTGGCAC
Suggested primer 2:TGCCGCAATCATATGCAACG