Insertion junction: CLIP2.054248_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054248
Chromosome:chromosome 2
Location:4003400
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102776 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAGCGTAGGAGGCTGCTGCTGCTGCTGCTGTTGGTGGTGGTGCACACT
Internal bar code:TATCTCGTCCTGTTTCATGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4003
LEAP-Seq percent confirming:93.2203
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCGCAATCATATGCAACG
Suggested primer 2:ATCACCACTACTGCTGGCAC